Web Tools
Online sequence analysis tools and web-based sequence translation platforms.
AlphaFold Protein Structure Database
Free database providing AI-predicted protein structures for millions of proteins across species.
protein-structures
AI-predicted
database
BLAST
Web-based sequence similarity search tool from NCBI for nucleotide and protein sequences.
sequence-similarity
NCBI
search
ClustalW
Web interface for multiple sequence alignment of DNA or protein sequences.
multiple-alignment
web-interface
DNA-protein
DAVID
Web-based functional annotation tool providing biological meaning behind large lists of genes.
functional-annotation
gene-lists
biological-meaning
Ensembl
Comprehensive web-based genome browser providing access to vertebrate genome annotation and analysis tools.
genome-browser
vertebrate
annotation
Enrichr
Comprehensive gene set enrichment analysis web server with extensive libraries of annotated gene sets.
enrichment-analysis
gene-sets
comprehensive
Galaxy
Open, web-based platform for accessible, reproducible, and transparent computational research.
open-platform
reproducible
computational-research
Gene Ontology
Web resource providing structured controlled vocabularies for gene and gene product attributes.
controlled-vocabulary
gene-attributes
structured
GEO
Gene Expression Omnibus - NCBI's public functional genomics data repository and analysis tools.
gene-expression
repository
functional-genomics
InterPro
Web resource for protein sequence analysis and functional classification using multiple databases.
protein-analysis
functional-classification
multiple-databases
KEGG
Web-based database resource for understanding high-level functions and biological systems.
database
biological-systems
pathways
Metascape
Web-based portal providing comprehensive gene list annotation and analysis with automated workflows.
gene-annotation
automated-workflows
comprehensive
NCBI
National Center for Biotechnology Information providing access to biomedical and genomic information.
biomedical-information
genomic
government
Pfam
Web database of protein families and domains with comprehensive sequence analysis tools.
protein-families
domains
sequence-analysis
Protein Data Bank
Web portal for 3D structural data of biological macromolecules with analysis and visualization tools.
3D-structures
macromolecules
visualization
Reactome
Web-based database of human biological pathways and processes with detailed pathway maps.
biological-pathways
human
pathway-maps
STRING
Web resource for protein-protein interaction networks with comprehensive analysis and visualization tools.
protein-interactions
networks
visualization
SWISS-MODEL
Web-based integrated service for protein structure homology modeling with automated workflows.
protein-structure
homology-modeling
automated
UCSC Genome Browser
Web-based genome browser providing visualization and analysis of genomic data across multiple species.
genome-browser
visualization
multiple-species
UniProt
Web resource providing comprehensive protein sequence and annotation data with functional information.
protein-sequences
annotation
functional-information
WebGestalt
WEB-based Gene SeT AnaLysis Toolkit for functional genomics and proteomics analysis.
gene-set-analysis
functional-genomics
proteomics